SCOPe 2.01: Domain d1d4da2: 1d4d A:103-359,A:506-569

Lineage for d1d4da2 (1d4d A:103-359,A:506-569)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
   core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander

4. Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (8 families)

5. Family c.3.1.4: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain [51934] (5 proteins)

6. Protein Flavocytochrome c3 (respiratory fumarate reductase) [51940] (2 species)
   contains additional N-terminal multiheme domain

7. Species Shewanella putrefaciens [TaxId:24] [51942] (3 PDB entries)

8. Domain d1d4da2: 1d4d A:103-359,A:506-569 [30439]
   Other proteins in same PDB: d1d4da1, d1d4da3
   complexed with fad, hem, sin

Details for d1d4da2

PDB Entry: 1d4d, 2.5 Å

PDB Description: crystal structure of the succinate complexed form of the flavocytochrome c fumarate reductase of shewanella putrefaciens strain mr-1

PDB Compounds: (A:) flavocytochrome c fumarate reductase

SCOPe Domain Sequences for d1d4da2:

Sequence, based on SEQRES records:

>d1d4da2 c.3.1.4 (A:103-359,A:506-569) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}
kfvpvdadkaaqdkaiaagvkettdvviigsggaglaaavsardagakvillekepipgg
ntklaaggmnaaetkpqaklgiedkkqimiddtmkggrnindpelvkvlannssdsidwl
tsmgadmtdvgrmggasvnrshrptggagvgahvaqvlwdnavkrgtdirlnsrvvrile
dasgkvtgvlvkgeytgyyvikadavviaaggfaknnervskydpklkgfkatnhpgatg
dgldvalqagaatrdlqXmgglvidtkaevksektakpitglyaagevtggvhganrlgg
naisdivtygriagasaakfak

Sequence, based on observed residues (ATOM records):

>d1d4da2 c.3.1.4 (A:103-359,A:506-569) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}
kfvpvdadkaaqdkaiaagvkettdvviigsggaglaaavsardagakvillekepipgg
ntklaaggmnaaetkpqaklgiedkkqimiddtmkggrnindpelvkvlannssdsidwl
tsmgadmtdvgrmggasvnrshrptggagvgahvaqvlwdnavkrgtdirlnsrvvrile
dgkvtgvlvkgeytgyyvikadavviaaggfaknnervskydpklkgfkatnhpgatgdg
ldvalqagaatrdlqXmgglvidtkaevksektakpitglyaagevtggvhganrlggna
isdivtygriagasaakfak

Timeline for d1d4da2:

• d1d4da2 first appeared (with stable ids) in SCOP 1.55
  
• d1d4da2 appears in SCOP 1.75
  
• d1d4da2 appears in SCOPe 2.02
  
• d1d4da2 appears in the current release, SCOPe 2.08