SCOPe 2.07: Domain d2ipya1: 2ipy A:2-630

Lineage for d2ipya1 (2ipy A:2-630)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.83: Aconitase iron-sulfur domain [53731] (1 superfamily)
   consists of three similar domains with 3 layers (a/b/a) each; duplication
   core: parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.83.1: Aconitase iron-sulfur domain [53732] (1 family)

5. Family c.83.1.1: Aconitase iron-sulfur domain [53733] (4 protein domains)
   duplication: consists of three structurally similar subdomains with subdomains 1 and 3 being related by pseudo twofold symmetry

6. Protein automated matches [233562] (1 species)
   not a true protein

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [233571] (3 PDB entries)

8. Domain d2ipya1: 2ipy A:2-630 [304074]
   Other proteins in same PDB: d2ipya2, d2ipyb2
   automated match to d2b3ya2
   protein/RNA complex

Details for d2ipya1

PDB Entry: 2ipy, 2.8 Å

PDB Description: crystal structure of iron regulatory protein 1 in complex with ferritin H IRE-RNA

PDB Compounds: (A:) Iron-responsive element-binding protein 1

SCOPe Domain Sequences for d2ipya1:

Sequence, based on SEQRES records:

>d2ipya1 c.83.1.1 (A:2-630) automated matches {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
snpfaylaepldpaqpgkkffnlnkldysrygrlpfsirvlleaavrncdkflvkkedie
nilnwnvtqhmnievpfkparvilqdftgvpsvvdfaamrdavkklggdpekinpicpvd
lvidhsiqvdfnrradslqknqdlefernrerfeflkwgskafrnmriippgsgiihqvn
leylarvvfdqdgyyypdslvgtdshttmidglgvlgwgvggieaeavmlgqpismvlpq
vigyrlmgkphplvtstdivltitkhlrqvgvvgkfveffgpgvaqlsiadratianmcp
eygatatffpvdevsikylvqtgrdeskvkqirkylqavgmfrdysdpsqdpdftqvvel
dlktvvpccsgpkrpqdkvavsdmkkdfesclgakqgfkgfqvapdhhndhktfiyndse
ftlshgsvviaaitsstntsnpsvmlgagllakkavdaglnvkpyvktslspgsgvvtyy
lresgvmpylsqlgfdvvgygsmtsignsgplpepvveaitqgdlvavgvlsgnrnfegr
vhpntranylaspplviayaiagtiridfekeplgtnakgqqvflrdiwptreeiqaver
qyvipgmftevyqkietvnaswnalaaps

Sequence, based on observed residues (ATOM records):

>d2ipya1 c.83.1.1 (A:2-630) automated matches {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
snpfaylaepldpaqpgkkffnlnkldysrygrlpfsirvlleaavrncdkflvkkedie
nilnwnvtqhmnievpfkparvilqdftgvpsvvdfaamrdavkklggdpekinpicpvd
lvidfernrerfeflkwgskafrnmriippgsgiihqvnleylarvvfdqdgyyypdslv
gtdshttmidglgvlgwgvggieaeavmlgqpismvlpqvigyrlmgkphplvtstdivl
titkhlrqvgvvgkfveffgpgvaqlsiadratianmcpeygatatffpvdevsikylvq
tgrdeskvkqirkylqavgmfrdysdpsqdpdftqvveldlktvvpccsgpkrpqdkvav
sdmkkdfesclgakqgfkgfqvapdhhndhktfiyndseftlshgsvviaaitsstntsn
psvmlgagllakkavdaglnvkpyvktslspgsgvvtyylresgvmpylsqlgfdvplpe
pvveaitqgdlvavgvlsgnrnfegrvhpntranylaspplviayaiagtiridfekepl
gtnakgqqvflrdiwptreeiqaverqyvipgmftevyqkietvnass

Timeline for d2ipya1:

• d2ipya1 first appeared in SCOPe 2.06