Lineage for d1pdsa_ (1pds A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2090553Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 protein domains)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 2091578Protein Negative transcriptional regulator NmrA [69407] (1 species)
    has an UDP-galactose 4-epimerase-like structure but evolved a different function
  7. 2091579Species Emericella nidulans (Aspergillus nidulans) [TaxId:162425] [69408] (6 PDB entries)
    Uniprot O59919
  8. 2091583Domain d1pdsa_: 1pds A: [302892]
    automated match to d1k6xa_
    complexed with cl, nap

Details for d1pdsa_

PDB Entry: 1pds (more details), 1.7 Å

PDB Description: Crystal Structure of NmrA, a Negative Transcriptional Regulator, in Complex with NADP at 1.7A Resolution
PDB Compounds: (A:) nitrogen metabolite repression regulator nmra

SCOPe Domain Sequences for d1pdsa_:

Sequence, based on SEQRES records: (download)

>d1pdsa_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}
qqkktiavvnatgrqaaslirvaaavghhvraqvhslkgliaeelqaipnvtlfqgplln
nvplmdtlfegahlafinttsqagdeiaigkdladaakragtiqhyiyssmpdhslygpw
pavpmwapkftvenyvrqlglpstfvyagiynnnftslpyplfqmelmpdgtfewhapfd
pdiplpwldaehdvgpallqifkdgpqkwnghrialtfetlspvqvcaafsralnrrvty
vqvpkveikvnipvgyreqleaievvfgehkapyfplpefsrpaagspkglgpangkgag
agmmqgpggvisqrvtdearklwsgwrdmeeyarevfpieeeangldwml

Sequence, based on observed residues (ATOM records): (download)

>d1pdsa_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}
qqkktiavvnatgrqaaslirvaaavghhvraqvhslkgliaeelqaipnvtlfqgplln
nvplmdtlfegahlafinttsqagdeiaigkdladaakragtiqhyiyssmpdhslygpw
pavpmwapkftvenyvrqlglpstfvyagiynnnftslpyplfqmelmpdgtfewhapfd
pdiplpwldaehdvgpallqifkdgpqkwnghrialtfetlspvqvcaafsralnrrvty
vqvpkveikvnipvgyreqleaievvfgehkapyfplpefsggvisqrvtdearklwsgw
rdmeeyarevfpieeeangldwml

SCOPe Domain Coordinates for d1pdsa_:

Click to download the PDB-style file with coordinates for d1pdsa_.
(The format of our PDB-style files is described here.)

Timeline for d1pdsa_:

  • d1pdsa_ is new in SCOPe 2.06-stable