Lineage for d1kina_ (1kin A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2865685Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
    parallel beta-sheet of 5 strands, order 23145
  6. 2866233Protein automated matches [190087] (15 species)
    not a true protein
  7. 2866283Species Herpes simplex virus type i [311158] (1 PDB entry)
  8. 2866284Domain d1kina_: 1kin A: [302634]
    automated match to d1p7cb_
    protein/DNA complex; complexed with so4, thm

Details for d1kina_

PDB Entry: 1kin (more details), 2 Å

PDB Description: crystal structure of thymidine kinase from herpes simplex virus type i complexed with deoxythymidine
PDB Compounds: (A:) Thymidine kinase

SCOPe Domain Sequences for d1kina_:

Sequence, based on SEQRES records: (download)

>d1kina_ c.37.1.1 (A:) automated matches {Herpes simplex virus type i}
mptllrvyidgphgmgkttttqllvalgsrddivyvpepmtywrvlgasetianiyttqh
rldqgeisagdaavvmtsaqitmgmpyavtdavlaphiggeagsshapppaltlifdrhp
iaallcypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrhidrlakrqrpge
rldlamlaairrvygllantvrylqcggswredwgqlsgaavppqgaepqsnagprphig
dtlftlfrapellapngdlynvfawaldvlakrlrsmhvfildydqspagcrdallqlts
gmvqthvttpgsipticdlartfaremge

Sequence, based on observed residues (ATOM records): (download)

>d1kina_ c.37.1.1 (A:) automated matches {Herpes simplex virus type i}
mptllrvyidgphgmgkttttqllvaldivyvpepmtywrvlgasetianiyttqhrldq
geisagdaavvmtsaqitmgmpyavtdavlaphiggeagssapppaltlifdrhpiaall
cypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrhidrlakrqrpgerldla
mlaairrvygllantvrylqcggswredwgqlprphigdtlftlfrapellapngdlynv
fawaldvlakrlrsmhvfildydqspagcrdallqltsgmvqthvttpgsipticdlart
faremge

SCOPe Domain Coordinates for d1kina_:

Click to download the PDB-style file with coordinates for d1kina_.
(The format of our PDB-style files is described here.)

Timeline for d1kina_: