SCOPe 2.08: Domain d1k87a4: 1k87 A:262-612

Lineage for d1k87a4 (1k87 A:262-612)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.23: FAD-linked oxidoreductase [51730] (3 families)
   distinct cofactor-binding mode from both FMN- and NAD(P)-linked TIM-barrel oxidoreductases; families are related by a circular permutation

5. Family c.1.23.2: Proline dehydrohenase domain of bifunctional PutA protein [82279] (2 proteins)
   automatically mapped to Pfam PF01619

6. Protein automated matches [226993] (2 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [311155] (1 PDB entry)

8. Domain d1k87a4: 1k87 A:262-612 [302615]
   Other proteins in same PDB: d1k87a3
   automated match to d3itga2
   complexed with 1pe, fad, gol, lac, trs

Details for d1k87a4

PDB Entry: 1k87, 2 Å

PDB Description: Crystal structure of E.coli PutA (residues 1-669)

PDB Compounds: (A:) proline dehydrogenase

SCOPe Domain Sequences for d1k87a4:

Sequence; same for both SEQRES and ATOM records:

>d1k87a4 c.1.23.2 (A:262-612) automated matches {Escherichia coli [TaxId: 562]}
getiaealanarkleekgfrysydmlgeaaltaadaqaymvsyqqaihaigkasngrgiy
egpgisiklsalhprysraqydrvmeelyprlksltllarqydiginidaeeadrleisl
dlleklcfepelagwngigfviqayqkrcplvidylidlatrsrrrlmirlvkgaywdse
ikraqmdglegypvytrkvytdvsylacakkllavpnliypqfathnahtlaaiyqlagq
nyypgqyefqclhgmgeplyeqvtgkvadgklnrpcriyapvgthetllaylvrrlleng
antsfvnriadtslpldelvadpvtaveklaqqegqtglphpkiplprdly

Timeline for d1k87a4:

• d1k87a4 first appeared in SCOPe 2.06
  
• d1k87a4 appears in SCOPe 2.07