SCOPe 2.08: Domain d1burd4: 1bur D:148-475

Lineage for d1burd4 (1bur D:148-475)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)

7. Species Spinach (Spinacia oleracea) [TaxId:3562] [51653] (11 PDB entries)

8. Domain d1burd4: 1bur D:148-475 [302254]
   Other proteins in same PDB: d1bura3, d1burb3, d1burc3, d1burd3, d1burs_, d1burt_, d1buru_, d1burv_
   automated match to d8ruca1
   complexed with cap, mg

Details for d1burd4

PDB Entry: 1bur, 1.8 Å

PDB Description: ribulose 1,5-bisphosphate carboxylase/oxygenase complexed with carbon dioxide, mg2+ and 2-carboxyarabinitol-1,5-bisphosphate

PDB Compounds: (D:) ribulose 1,5-bisphosphate carboxylase/oxygenase

SCOPe Domain Sequences for d1burd4:

Sequence; same for both SEQRES and ATOM records:

>d1burd4 c.1.14.1 (D:148-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Spinach (Spinacia oleracea) [TaxId: 3562]}
fqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldftkddenvn
sqpfmrwrdrflfcaealykaqaetgeikghylnatagtcedmmkravfarelgvpivmh
dyltggftanttlshycrdnglllhihramhavidrqknhgmhfrvlakalrlsggdhih
sgtvvgklegerditlgfvdllrddytekdrsrgiyftqswvstpgvlpvasggihvwhm
palteifgddsvlqfgggtlghpwgnapgavanrvaleacvqarnegrdlaregntiire
atkwspelaaacevwkeikfefpamdtv

Timeline for d1burd4:

• d1burd4 first appeared in SCOPe 2.06
  
• d1burd4 appears in SCOPe 2.07