SCOPe 2.08: Domain d1bl2b1: 1bl2 B:10-190

Lineage for d1bl2b1 (1bl2 B:10-190)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.18: E set domains [81296] (27 families)
   "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

5. Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)

6. Protein Transglutaminase N-terminal domain [49235] (4 species)
   elaborated with many loop insertions in the common fold

7. Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (9 PDB entries)
   Coagulation factor XIII

8. Domain d1bl2b1: 1bl2 B:10-190 [302235]
   Other proteins in same PDB: d1bl2a2, d1bl2a3, d1bl2a4, d1bl2b2, d1bl2b3, d1bl2b4
   automated match to d1f13a1
   complexed with sr

Details for d1bl2b1

PDB Entry: 1bl2, 2.5 Å

PDB Description: human factor xiii with strontium bound in the ion site

PDB Compounds: (B:) coagulation factor xiii

SCOPe Domain Sequences for d1bl2b1:

Sequence, based on SEQRES records:

>d1bl2b1 b.1.18.9 (B:10-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
grravppnnsnaaeddlptvelqgvvprgvnlqeflnvtsvhlfkerwdtnkvdhhtdky
ennklivrrgqsfyvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsgk
wgakivmredrsvrlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwce
d

Sequence, based on observed residues (ATOM records):

>d1bl2b1 b.1.18.9 (B:10-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
grravppnnsnaaeddlptvelqgvvlqeflnvtsvhlfkerwdtnkvdhhtdkyennkl
ivrrgqsfyvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsgkwgaki
vmredrsvrlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwced

Timeline for d1bl2b1:

• d1bl2b1 first appeared in SCOPe 2.06
  
• d1bl2b1 appears in SCOPe 2.07