Lineage for d1gdhb1 (1gdh B:101-291)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2426096Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2426097Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2428936Family c.2.1.4: Formate/glycerate dehydrogenases, NAD-domain [51830] (10 proteins)
    this domain interrupts the other domain which defines family
  6. 2428940Protein D-glycerate dehydrogenase [51837] (1 species)
  7. 2428941Species Hyphomicrobium methylovorum [TaxId:84] [51838] (1 PDB entry)
  8. 2428943Domain d1gdhb1: 1gdh B:101-291 [30096]
    Other proteins in same PDB: d1gdha2, d1gdhb2
    complexed with so4

Details for d1gdhb1

PDB Entry: 1gdh (more details), 2.4 Å

PDB Description: crystal structure of a nad-dependent d-glycerate dehydrogenase at 2.4 angstroms resolution
PDB Compounds: (B:) d-glycerate dehydrogenase

SCOPe Domain Sequences for d1gdhb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gdhb1 c.2.1.4 (B:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

SCOPe Domain Coordinates for d1gdhb1:

Click to download the PDB-style file with coordinates for d1gdhb1.
(The format of our PDB-style files is described here.)

Timeline for d1gdhb1:

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Domains from same chain:
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