SCOPe 2.03: Domain d3dapb1: 3dap B:1-118,B:269-320

Lineage for d3dapb1 (3dap B:1-118,B:269-320)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Diaminopimelic acid dehydrogenase (DAPDH) [51819] (1 species)

7. Species Corynebacterium glutamicum [TaxId:1718] [51820] (4 PDB entries)

8. Domain d3dapb1: 3dap B:1-118,B:269-320 [30052]
   Other proteins in same PDB: d3dapa2, d3dapb2
   complexed with da3, ndp

Details for d3dapb1

PDB Entry: 3dap, 2.2 Å

PDB Description: c. glutamicum dap dehydrogenase in complex with nadp+ and the inhibitor 5s-isoxazoline

PDB Compounds: (B:) diaminopimelic acid dehydrogenase

SCOPe Domain Sequences for d3dapb1:

Sequence; same for both SEQRES and ATOM records:

>d3dapb1 c.2.1.3 (B:1-118,B:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}
mtnirvaivgygnlgrsvekliakqpdmdlvgifsrratldtktpvfdvadvdkhaddvd
vlflcmgsatdipeqapkfaqfactvdtydnhrdiprhrqvmneaataagnvalvstgXr
npdftassqiafgraahrmkqqgqsgaftvlevapyllspenlddliardv

Timeline for d3dapb1:

• d3dapb1 first appeared (with stable ids) in SCOP 1.55
  
• d3dapb1 appears in SCOPe 2.02
  
• d3dapb1 appears in SCOPe 2.04
  
• d3dapb1 appears in the current release, SCOPe 2.08