Lineage for d3dapa1 (3dap A:1-118,A:269-320)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1826588Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1826589Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1828622Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 1828754Protein Diaminopimelic acid dehydrogenase (DAPDH) [51819] (1 species)
  7. 1828755Species Corynebacterium glutamicum [TaxId:1718] [51820] (4 PDB entries)
  8. 1828758Domain d3dapa1: 3dap A:1-118,A:269-320 [30051]
    Other proteins in same PDB: d3dapa2, d3dapb2
    complexed with da3, ndp

Details for d3dapa1

PDB Entry: 3dap (more details), 2.2 Å

PDB Description: c. glutamicum dap dehydrogenase in complex with nadp+ and the inhibitor 5s-isoxazoline
PDB Compounds: (A:) diaminopimelic acid dehydrogenase

SCOPe Domain Sequences for d3dapa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dapa1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}
mtnirvaivgygnlgrsvekliakqpdmdlvgifsrratldtktpvfdvadvdkhaddvd
vlflcmgsatdipeqapkfaqfactvdtydnhrdiprhrqvmneaataagnvalvstgXr
npdftassqiafgraahrmkqqgqsgaftvlevapyllspenlddliardv

SCOPe Domain Coordinates for d3dapa1:

Click to download the PDB-style file with coordinates for d3dapa1.
(The format of our PDB-style files is described here.)

Timeline for d3dapa1:

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Domains from same chain:
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d3dapa2