SCOPe 2.07: Domain d1gyqd1: 1gyq D:1-165,D:335-358

Lineage for d1gyqd1 (1gyq D:1-165,D:335-358)

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
family members also share a common alpha+beta fold in C-terminal domain
Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (21 species)
Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51809] (5 PDB entries)
Domain d1gyqd1: 1gyq D:1-165,D:335-358 [30015]
Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
complexed with nbd

Details for d1gyqd1

PDB Entry: 1gyq (more details), 3.4 Å

PDB Description: crystal structure of glycosomal glyceraldehyde from leishmania mexicana in complex with n6-benzyl-nad

PDB Compounds: (D:) protein (glyceraldehyde-3-phosphate dehydrogenase)

SCOPe Domain Sequences for d1gyqd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gyqd1 c.2.1.3 (D:1-165,D:335-358) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
apikvgingfgrigrmvfqaicdqgligteidvvavvdmstnaeyfayqmkhdtvhgrpk
ytveavksspsvetadvlvvnghrikcvkaqrnpadlpwgklgvdyviestglftdklka
eghikggakkvvisapasggaktivmgvnqheyspashhvvsnasXnewayshrvvdlvr
ymaakdaass

SCOPe Domain Coordinates for d1gyqd1:

Click to download the PDB-style file with coordinates for d1gyqd1.
(The format of our PDB-style files is described here.)

Timeline for d1gyqd1: