SCOPe 2.03: Domain d1dc6b1: 1dc6 B:0-148,B:313-330

Lineage for d1dc6b1 (1dc6 B:0-148,B:313-330)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)

7. Species Escherichia coli [TaxId:562] [51802] (9 PDB entries)
   Uniprot P06977

8. Domain d1dc6b1: 1dc6 B:0-148,B:313-330 [29957]
   Other proteins in same PDB: d1dc6a2, d1dc6b2
   complexed with nad

Details for d1dc6b1

PDB Entry: 1dc6, 2 Å

PDB Description: structural analysis of glyceraldehyde 3-phosphate dehydrogenase from escherichia coli: direct evidence for substrate binding and cofactor-induced conformational changes.

PDB Compounds: (B:) glyceraldehyde-3-phosphate dehydrogenase

SCOPe Domain Sequences for d1dc6b1:

Sequence; same for both SEQRES and ATOM records:

>d1dc6b1 c.2.1.3 (B:0-148,B:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}
tikvgingfgrigrivfraaqkrsdieivaindlldadymaymlkydsthgrfdgtvevk
dghlivngkkirvtaerdpanlkwdevgvdvvaeatglfltdetarkhitagakkvvmtg
pskdntpmfvkganfdkyagqdivsnasXnetgysnkvldliahisk

Timeline for d1dc6b1:

• d1dc6b1 first appeared (with stable ids) in SCOP 1.55
  
• d1dc6b1 appears in SCOPe 2.02
  
• d1dc6b1 appears in SCOPe 2.04
  
• d1dc6b1 appears in the current release, SCOPe 2.08