SCOPe 2.05: Domain d1gado1: 1gad O:0-148,O:313-330

Lineage for d1gado1 (1gad O:0-148,O:313-330)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)

7. Species Escherichia coli [TaxId:562] [51802] (9 PDB entries)
   Uniprot P06977

8. Domain d1gado1: 1gad O:0-148,O:313-330 [29950]
   Other proteins in same PDB: d1gado2, d1gadp2
   complexed with nad; mutant

Details for d1gado1

PDB Entry: 1gad, 1.8 Å

PDB Description: comparison of the structures of wild type and a n313t mutant of escherichia coli glyceraldehyde 3-phosphate dehydrogenases: implication for nad binding and cooperativity

PDB Compounds: (O:) d-glyceraldehyde-3-phosphate dehydrogenase

SCOPe Domain Sequences for d1gado1:

Sequence; same for both SEQRES and ATOM records:

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}
tikvgingfgrigrivfraaqkrsdieivaindlldadymaymlkydsthgrfdgtvevk
dghlivngkkirvtaerdpanlkwdevgvdvvaeatglfltdetarkhitagakkvvmtg
pskdntpmfvkganfdkyagqdivsnasXnetgysnkvldliahisk

Timeline for d1gado1:

• d1gado1 first appeared (with stable ids) in SCOP 1.55
  
• d1gado1 appears in SCOPe 2.04
  
• d1gado1 appears in SCOPe 2.06
  
• d1gado1 appears in the current release, SCOPe 2.08