SCOP 1.75: Domain d1bdba_: 1bdb A:

Lineage for d1bdba_ (1bdb A:)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (70 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase [51780] (1 species)

7. Species Pseudomonas sp., lb400 [TaxId:306] [51781] (1 PDB entry)

8. Domain d1bdba_: 1bdb A: [29874]
   complexed with nad

Details for d1bdba_

PDB Entry: 1bdb, 2 Å

PDB Description: cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from pseudomonas sp. lb400

PDB Compounds: (A:) cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase

SCOP Domain Sequences for d1bdba_:

Sequence, based on SEQRES records:

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}
mklkgeavlitggasglgralvdrfvaegakvavldksaerlaeletdhgdnvlgivgdv
rsledqkqaasrcvarfgkidtlipnagiwdystalvdlpeesldaafdevfhinvkgyi
havkaclpalvasrgnviftisnagfypngggplytaakhaivglvrelafelapyvrvn
gvgsgginsdlrgpsslgmgskaistvpladmlksvlpigrmpeveeytgayvffatrgd
aapatgallnydgglgvrgffsgaggndlleqlnih

Sequence, based on observed residues (ATOM records):

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}
mklkgeavlitggasglgralvdrfvaegakvavldksaerlaeletdhgdnvlgivgdv
rsledqkqaasrcvarfgkidtlipnagiwdystalvdlpeesldaafdevfhinvkgyi
havkaclpalvasrgnviftisnagfypngggplytaakhaivglvrelafelapyvrvn
gvgsgginsdlrgpsslgpladmlksvlpigrmpeveeytgayvffatrgdaapatgall
nydgglgvrgffsgaggndlleqlnih

Timeline for d1bdba_:

• d1bdba_ first appeared (with stable ids) in SCOP 1.55, called d1bdb__
  
• d1bdba_ appears in SCOP 1.73
  
• d1bdba_ appears in SCOPe 2.01
  
• d1bdba_ appears in the current release, SCOPe 2.08