SCOP 1.71: Domain d1pedb2: 1ped B:140-313

Lineage for d1pedb2 (1ped B:140-313)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families)

5. Family c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain [51736] (16 proteins)
   N-terminal all-beta domain defines family

6. Protein Bacterial secondary alcohol dehydrogenase [51742] (2 species)

7. Species Clostridium beijerinckii [51743] (3 PDB entries)

8. Domain d1pedb2: 1ped B:140-313 [29770]
   Other proteins in same PDB: d1peda1, d1pedb1, d1pedc1, d1pedd1

Details for d1pedb2

PDB Entry: 1ped, 2.15 Å

PDB Description: bacterial secondary alcohol dehydrogenase (apo-form)

SCOP Domain Sequences for d1pedb2:

Sequence; same for both SEQRES and ATOM records:

>d1pedb2 c.2.1.1 (B:140-313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii}
mplenavmitdmmttgfhgaeladiqmgssvvvigigavglmgiagaklrgagriigvgs
rpicveaakfygatdilnyknghivdqvmkltngkgvdrvimagggsetlsqavsmvkpg
giisninyhgsgdalliprvewgcgmahktikgglcpggrlraemlrdmvvynr

Timeline for d1pedb2:

• d1pedb2 first appeared (with stable ids) in SCOP 1.55
  
• d1pedb2 appears in SCOP 1.69
  
• d1pedb2 appears in SCOP 1.73
  
• d1pedb2 appears in the current release, SCOPe 2.08