SCOPe 2.08: Domain d1reqc1: 1req C:2-560

Lineage for d1reqc1 (1req C:2-560)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.19: Cobalamin (vitamin B12)-dependent enzymes [51703] (4 families)

5. Family c.1.19.1: Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain [51704] (2 proteins)
   the subunits are clearly related but only one (alpha) is active
   automatically mapped to Pfam PF01642

6. Protein Methylmalonyl-CoA mutase alpha subunit, domain 1 [88709] (1 species)

7. Species Propionibacterium freudenreichii, subsp. shermanii [TaxId:1744] [88710] (8 PDB entries)

8. Domain d1reqc1: 1req C:2-560 [29622]
   Other proteins in same PDB: d1reqa2, d1reqb1, d1reqb2, d1reqc2, d1reqd1, d1reqd2
   complexed with b12, dca, gol

Details for d1reqc1

PDB Entry: 1req, 2 Å

PDB Description: methylmalonyl-coa mutase

PDB Compounds: (C:) methylmalonyl-coa mutase

SCOPe Domain Sequences for d1reqc1:

Sequence; same for both SEQRES and ATOM records:

>d1reqc1 c.1.19.1 (C:2-560) Methylmalonyl-CoA mutase alpha subunit, domain 1 {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
stlprfdsvdlgnapvpadaarrfeelaakagtgeawetaeqipvgtlfnedvykdmdwl
dtyagippfvhgpyatmyafrpwtirqyagfstakesnafyrrnlaagqkglsvafdlpt
hrgydsdnprvagdvgmagvaidsiydmrelfagipldqmsvsmtmngavlpilalyvvt
aeeqgvkpeqlagtiqndilkefmvrntyiyppqpsmriiseifaytsanmpkwnsisis
gyhmqeagatadiemaytladgvdyiragesvglnvdqfaprlsffwgigmnffmevakl
raarmlwaklvhqfgpknpksmslrthsqtsgwsltaqdvynnvvrtcieamaatqghtq
slhtnsldeaialptdfsariarntqlflqqesgttrvidpwsgsayveeltwdlarkaw
ghiqevekvggmakaiekgipkmrieeaaartqaridsgrqpligvnkyrleheppldvl
kvdnstvlaeqkaklvklraerdpekvkaaldkitwaagnpddkdpdrnllklcidagra
matvgemsdalekvfgryt

Timeline for d1reqc1:

• d1reqc1 first appeared (with stable ids) in SCOP 1.55
  
• d1reqc1 appears in SCOPe 2.07