SCOPe 2.05: Domain d3ximd_: 3xim D:

Lineage for d3ximd_ (3xim D:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (13 species)

7. Species Actinoplanes missouriensis [TaxId:1866] [51673] (14 PDB entries)

8. Domain d3ximd_: 3xim D: [29480]
   complexed with co, sor

Details for d3ximd_

PDB Entry: 3xim, 2.3 Å

PDB Description: arginine residues as stabilizing elements in proteins

PDB Compounds: (D:) d-xylose isomerase

SCOPe Domain Sequences for d3ximd_:

Sequence; same for both SEQRES and ATOM records:

>d3ximd_ c.1.15.3 (D:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]}
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar

Timeline for d3ximd_:

• d3ximd_ first appeared (with stable ids) in SCOP 1.55
  
• d3ximd_ appears in SCOPe 2.04
  
• d3ximd_ appears in SCOPe 2.06
  
• d3ximd_ appears in the current release, SCOPe 2.08