SCOPe 2.04: Domain d1xldb_: 1xld B:

Lineage for d1xldb_ (1xld B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (13 species)

7. Species Arthrobacter, strain b3728 [TaxId:1663] [51672] (17 PDB entries)

8. Domain d1xldb_: 1xld B: [29450]
   complexed with mn, xyl

Details for d1xldb_

PDB Entry: 1xld, 2.5 Å

PDB Description: mechanism for aldose-ketose interconversion by d-xylose isomerase involving ring opening followed by a 1,2-hydride shift

PDB Compounds: (B:) d-xylose isomerase

SCOPe Domain Sequences for d1xldb_:

Sequence; same for both SEQRES and ATOM records:

>d1xldb_ c.1.15.3 (B:) D-xylose isomerase {Arthrobacter, strain b3728 [TaxId: 1663]}
vqptpadhftfglwtvgwtgadpfgvatrknldpveavhklaelgaygitfhdndlipfd
ateaerekilgdfnqalkdtglkvpmvttnlfshpvfkdggftsndrsirrfalakvlhn
idlaaemgaetfvmwggregseydgskdlaaaldrmregvdtaagyikdkgynlrialep
kpneprgdiflptvghglafieqlehgdivglnpetgheqmaglnfthgiaqalwaeklf
hidlngqrgikydqdlvfghgdltsafftvdllengfpnggpkytgprhfdykpsrtdgy
dgvwdsakanmsmylllkeralafradpevqeamktsgvfelgettlnagesaadlmnds
asfagfdaeaaaernfafirlnqlaiehllgsr

Timeline for d1xldb_:

• d1xldb_ first appeared (with stable ids) in SCOP 1.55
  
• d1xldb_ appears in SCOPe 2.03
  
• d1xldb_ appears in SCOPe 2.05
  
• d1xldb_ appears in the current release, SCOPe 2.08