SCOPe 2.08: Domain d1d8wd_: 1d8w D:

Lineage for d1d8wd_ (1d8w D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.2: L-rhamnose isomerase [51662] (2 proteins)
   automatically mapped to Pfam PF06134

6. Protein L-rhamnose isomerase [51663] (1 species)

7. Species Escherichia coli [TaxId:562] [51664] (3 PDB entries)

8. Domain d1d8wd_: 1d8w D: [29397]
   complexed with zn

Details for d1d8wd_

PDB Entry: 1d8w, 1.6 Å

PDB Description: l-rhamnose isomerase

PDB Compounds: (D:) l-rhamnose isomerase

SCOPe Domain Sequences for d1d8wd_:

Sequence, based on SEQRES records:

>d1d8wd_ c.1.15.2 (D:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]}
mttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpegsltggiq
atgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwve
wakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtps
vmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgigaesytvg
snefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvl
lddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallralleptael
rkleapgdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr

Sequence, based on observed residues (ATOM records):

>d1d8wd_ c.1.15.2 (D:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]}
mttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfeypgkarnasel
radleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpsc
fshplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditv
drlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqta
lcldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrh
dlfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleapgdytarlal
leeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr

Timeline for d1d8wd_:

• d1d8wd_ first appeared (with stable ids) in SCOP 1.55
  
• d1d8wd_ appears in SCOPe 2.07