Lineage for d1rbaa1 (1rba A:138-441)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2838499Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2838500Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
    N-terminal domain is alpha+beta
  6. 2838501Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)
  7. 2838597Species Rhodospirillum rubrum [TaxId:1085] [51657] (5 PDB entries)
  8. 2838604Domain d1rbaa1: 1rba A:138-441 [29390]
    Other proteins in same PDB: d1rbaa2, d1rbab2

Details for d1rbaa1

PDB Entry: 1rba (more details), 2.6 Å

PDB Description: substitution of asp193 to asn at the active site of ribulose-1,5- bisphosphate carboxylase results in conformational changes
PDB Compounds: (A:) rubisco

SCOPe Domain Sequences for d1rbaa1:

Sequence, based on SEQRES records: (download)

>d1rbaa1 c.1.14.1 (A:138-441) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rhodospirillum rubrum [TaxId: 1085]}
gpsvnisalwkvlgrpevdgglvvgtiikpklglrpkpfaeachafwlggdfiknnepqg
nqpfaplrdtialvadamrraqdetgeaklfsanitaddpfeiiargeyvletfgenash
vallvdgyvagaaaittarrrfpdnflhyhraghgavtspqskrgytafvhckmarlqga
sgihtgtmgfgkmegessdraiaymltqdeaqgpfyrqswggmkactpiisggmnalrmp
gffenlgnanviltagggafghidgpvagarslrqawqawrdgvpvldyarehkelaraf
esfp

Sequence, based on observed residues (ATOM records): (download)

>d1rbaa1 c.1.14.1 (A:138-441) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rhodospirillum rubrum [TaxId: 1085]}
gpsvnisalwkvlgrpevdgglvvgtiikpklglrpkpfaeachafwlggdfiknnepqg
nqpfaplrdtialvadamrraqdetgeaklfsanitaddpfeiiargeyvletfgenash
vallvdgyvagaaaittarrrfpdnflhyhraghgavtspqskrgytafvhckmarlqga
sgihtgtsdraiaymltqdeaqgpfyrqswggmkactpiisggmnalrmpgffenlgnan
viltagggafghidgpvagarslrqawqawrdgvpvldyarehkelarafesfp

SCOPe Domain Coordinates for d1rbaa1:

Click to download the PDB-style file with coordinates for d1rbaa1.
(The format of our PDB-style files is described here.)

Timeline for d1rbaa1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1rbaa2