Lineage for d1mdr_1 (1mdr 133-359)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 570217Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 572967Superfamily c.1.11: Enolase C-terminal domain-like [51604] (2 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 573010Family c.1.11.2: D-glucarate dehydratase-like [51609] (11 proteins)
  6. 573078Protein Mandelate racemase [51617] (1 species)
  7. 573079Species Pseudomonas putida [TaxId:303] [51618] (6 PDB entries)
  8. 573083Domain d1mdr_1: 1mdr 133-359 [29248]
    Other proteins in same PDB: d1mdr_2
    complexed with mg, saa

Details for d1mdr_1

PDB Entry: 1mdr (more details), 2.1 Å

PDB Description: the role of lysine 166 in the mechanism of mandelate racemase from pseudomonas putida: mechanistic and crystallographic evidence for stereospecific alkylation by (r)-alpha-phenylglycidate

SCOP Domain Sequences for d1mdr_1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mdr_1 c.1.11.2 (133-359) Mandelate racemase {Pseudomonas putida}
pvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsirqavgddfgi
mvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvpvqmgenwlgp
eemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqeisahllaatpt
ahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv

SCOP Domain Coordinates for d1mdr_1:

Click to download the PDB-style file with coordinates for d1mdr_1.
(The format of our PDB-style files is described here.)

Timeline for d1mdr_1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1mdr_2