SCOPe 2.05: Domain d1d9ec_: 1d9e C:

Lineage for d1d9ec_ (1d9e C:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (4 species)

7. Species Escherichia coli [TaxId:562] [51603] (10 PDB entries)
   Uniprot P17579

8. Domain d1d9ec_: 1d9e C: [29197]
   complexed with so4

Details for d1d9ec_

PDB Entry: 1d9e, 2.4 Å

PDB Description: structure of e. coli kdo8p synthase

PDB Compounds: (C:) 3-deoxy-d-manno-octulosonate 8-phosphate synthase

SCOPe Domain Sequences for d1d9ec_:

Sequence, based on SEQRES records:

>d1d9ec_ c.1.10.4 (C:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Escherichia coli [TaxId: 562]}
mkqkvvsigdinvandlpfvlfggmnvlesrdlamricehyvtvtqklgipyvfkasfdk
anrssihsyrgpgleegmkifqelkqtfgvkiitdvhepsqaqpvadvvdviqlpaflar
qtdlveamaktgavinvkkpqfvspgqmgnivdkfkeggnekvilcdrganfgydnlvvd
mlgfsimkkvsgnspvifdvthalqcrdpfgaasggrraqvaelaragmavglaglfiea
hpdpehakcdgpsalplaklepflkqmkaiddlvkgfeeldtsk

Sequence, based on observed residues (ATOM records):

>d1d9ec_ c.1.10.4 (C:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Escherichia coli [TaxId: 562]}
mkqkvvsigdinvandlpfvlfggmnvlesrdlamricehyvtvtqklgipyvfkasfdk
anrssihsyrgpgleegmkifqelkqtfgvkiitdvhepsqaqpvadvvdviqlpaflar
qtdlveamaktgavinvkkpqfvspgqmgnivdkfkeggnekvilcdrganfgydnlvvd
mlgfsimkkvsgnspvifdvthalqraqvaelaragmavglaglfieahpdpepsalpla
klepflkqmkaiddlvkgfeeldtsk

Timeline for d1d9ec_:

• d1d9ec_ first appeared (with stable ids) in SCOP 1.55
  
• d1d9ec_ appears in SCOPe 2.04
  
• d1d9ec_ appears in SCOPe 2.06
  
• d1d9ec_ appears in the current release, SCOPe 2.08