Lineage for d1fdyd_ (1fdy D:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2089714Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2096922Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2096923Family c.1.10.1: Class I aldolase [51570] (13 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2097383Protein N-acetylneuraminate lyase [51571] (2 species)
  7. 2097384Species Escherichia coli [TaxId:562] [51572] (4 PDB entries)
  8. 2097396Domain d1fdyd_: 1fdy D: [29074]
    complexed with 3py

Details for d1fdyd_

PDB Entry: 1fdy (more details), 2.45 Å

PDB Description: n-acetylneuraminate lyase in complex with hydroxypyruvate
PDB Compounds: (D:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d1fdyd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1fdyd_ c.1.10.1 (D:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1fdyd_:

Click to download the PDB-style file with coordinates for d1fdyd_.
(The format of our PDB-style files is described here.)

Timeline for d1fdyd_: