Lineage for d1ef2a2 (1ef2 A:1130-1422,A:1476-1567)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2084338Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2084403Family c.1.9.2: alpha-subunit of urease, catalytic domain [51560] (1 protein)
  6. 2084404Protein alpha-subunit of urease, catalytic domain [51561] (4 species)
  7. 2084423Species Klebsiella aerogenes [TaxId:28451] [51562] (28 PDB entries)
  8. 2084449Domain d1ef2a2: 1ef2 A:1130-1422,A:1476-1567 [29051]
    Other proteins in same PDB: d1ef2a1, d1ef2b_, d1ef2c_
    complexed with mn

Details for d1ef2a2

PDB Entry: 1ef2 (more details), 2.5 Å

PDB Description: crystal structure of manganese-substituted klebsiella aerogenes urease
PDB Compounds: (A:) urease alpha subunit

SCOPe Domain Sequences for d1ef2a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ef2a2 c.1.9.2 (A:1130-1422,A:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]}

SCOPe Domain Coordinates for d1ef2a2:

Click to download the PDB-style file with coordinates for d1ef2a2.
(The format of our PDB-style files is described here.)

Timeline for d1ef2a2:

View in 3D
Domains from same chain:
(mouse over for more information)