Lineage for d2nuba4 (2nub A:488-706)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2491249Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2493668Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2494994Family c.55.3.15: PIWI domain C-terminal [310608] (4 proteins)
    PubMed 15565169 notes that both halves of PIWI are usually a single evolutionary unit; however, fragments have been characterized separately. The N-terminal half is (c.44.3.1)
  6. 2494995Protein Argonaute homologue Aq_1447 [310683] (1 species)
  7. 2494996Species Aquifex aeolicus [TaxId:63363] [310900] (4 PDB entries)
  8. 2495002Domain d2nuba4: 2nub A:488-706 [288700]
    Other proteins in same PDB: d2nuba1, d2nuba3

Details for d2nuba4

PDB Entry: 2nub (more details), 3.2 Å

PDB Description: Structure of Aquifex aeolicus Argonuate
PDB Compounds: (A:) Argonaute

SCOPe Domain Sequences for d2nuba4:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nuba4 c.55.3.15 (A:488-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]}

SCOPe Domain Coordinates for d2nuba4:

Click to download the PDB-style file with coordinates for d2nuba4.
(The format of our PDB-style files is described here.)

Timeline for d2nuba4: