SCOPe 2.06: Domain d1fa2a_: 1fa2 A:

Lineage for d1fa2a_ (1fa2 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein beta-Amylase [51481] (3 species)
   Common fold covers whole protein structure

7. Species Sweet potato (Ipomoea batatas) [TaxId:4120] [51484] (3 PDB entries)

8. Domain d1fa2a_: 1fa2 A: [28797]
   complexed with dom, dtt

Details for d1fa2a_

PDB Entry: 1fa2, 2.3 Å

PDB Description: crystal structure of beta-amylase from sweet potato

PDB Compounds: (A:) beta-amylase

SCOPe Domain Sequences for d1fa2a_:

Sequence; same for both SEQRES and ATOM records:

>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]}
apipgvmpignyvslyvmlplgvvnadnvfpdkekvedelkqvkaggcdgvmvdvwwgii
eakgpkqydwsayrelfqlvkkcglkiqaimsfhqcggnvgdavfipipqwilqigdknp
difytnragnrnqeylslgvdnqrlfqgrtalemyrdfmesfrdnmadflkagdivdiev
gcgaagelrypsypetqgwvfpgigefqcydkymvadwkeavkqagnadwempgkgagty
ndtpdkteffrpngtyktdmgkffltwysnkliihgdqvleeankvfvglrvniaakvsg
ihwwynhvshaaeltagfynvagrdgyrpiarmlarhhatlnftclemrdseqpaeaksa
pqelvqqvlssgwkeyidvagenalprydataynqmllklrpngvnlngppklkmsglty
lrlsddllqtdnfelfkkfvkkmhadldpspnaispavlersnsaitidelmeatkgsrp
fpwydvtdmpvdgsnpfd

Timeline for d1fa2a_:

• d1fa2a_ first appeared (with stable ids) in SCOP 1.55
  
• d1fa2a_ appears in SCOPe 2.05
  
• d1fa2a_ appears in SCOPe 2.07
  
• d1fa2a_ appears in the current release, SCOPe 2.08