SCOPe 2.08: Domain d1baga2: 1bag A:1-347

Lineage for d1baga2 (1bag A:1-347)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Bacterial alpha-amylase [51447] (10 species)

7. Species Bacillus subtilis [TaxId:1423] [51450] (2 PDB entries)
   Uniprot P00691

8. Domain d1baga2: 1bag A:1-347 [28707]
   Other proteins in same PDB: d1baga1
   complexed with ca

Details for d1baga2

PDB Entry: 1bag, 2.5 Å

PDB Description: alpha-amylase from bacillus subtilis complexed with maltopentaose

PDB Compounds: (A:) alpha-1,4-glucan-4-glucanohydrolase

SCOPe Domain Sequences for d1baga2:

Sequence; same for both SEQRES and ATOM records:

>d1baga2 c.1.8.1 (A:1-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}
ltapsiksgtilhawnwsfntlkhnmkdihdagytaiqtspinqvkegnqgdksmsnwyw
lyqptsyqignrylgteqefkemcaaaeeygikvivdavinhttfdyaaisnevksipnw
thgntqiknwsdrwdvtqnsllglydwntqntqvqsylkrfleralndgadgfrfdaakh
ielpddgsygsqfwpnitntsaefqygqilqdsasrdaayanymdvtasnyghsirsalk
nrnlgvsnishyasdvsadklvtwveshdtyanddeestwmsdddirlgwaviasrsgst
plffsrpegggngvrfpgksqigdrgsalfedqaitavnrfhnvmag

Timeline for d1baga2:

• d1baga2 first appeared (with stable ids) in SCOP 1.55, called d1bag_2
  
• d1baga2 appears in SCOPe 2.07