SCOPe 2.06: Domain d1aqha2: 1aqh A:1-354

Lineage for d1aqha2 (1aqh A:1-354)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Bacterial alpha-amylase [51447] (10 species)

7. Species Pseudoalteromonas haloplanktis [TaxId:228] [51449] (9 PDB entries)

8. Domain d1aqha2: 1aqh A:1-354 [28705]
   Other proteins in same PDB: d1aqha1
   complexed with ca, cl

Details for d1aqha2

PDB Entry: 1aqh, 2 Å

PDB Description: alpha-amylase from alteromonas haloplanctis

PDB Compounds: (A:) alpha-amylase

SCOPe Domain Sequences for d1aqha2:

Sequence; same for both SEQRES and ATOM records:

>d1aqha2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis [TaxId: 228]}
tpttfvhlfewnwqdvaqeceqylgpkgyaavqvsppnehitgsqwwtryqpvsyelqsr
ggnraqfidmvnrcsaagvdiyvdtlinhmaagsgtgtagnsfgnksfpiyspqdfhesc
tinnsdygndryrvqncelvgladldtasnyvqntiaayindlqaigvkgfrfdaskhva
asdiqslmakvngspvvfqevidqggeavgaseylstglvtefkystelgntfrngslaw
lsnfgegwgfmpsssavvfvdnhdnqrghggagnvitfedgrlydlanvfmlaypygypk
vmssydfhgdtdaggpnvpvhnngnlecfasnwkcehrwsyiaggvdfrnntad

Timeline for d1aqha2:

• d1aqha2 first appeared (with stable ids) in SCOP 1.55, called d1aqh_2
  
• d1aqha2 appears in SCOPe 2.05
  
• d1aqha2 appears in SCOPe 2.07
  
• d1aqha2 appears in the current release, SCOPe 2.08