Lineage for d1b54a_ (1b54 A:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2089714Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2092317Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2092396Family c.1.6.2: "Hypothetical" protein ybl036c [51427] (1 protein)
    automatically mapped to Pfam PF01168
  6. 2092397Protein "Hypothetical" protein ybl036c [51428] (1 species)
    structure from BNL's human proteome project
  7. 2092398Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51429] (2 PDB entries)
  8. 2092400Domain d1b54a_: 1b54 A: [28664]
    complexed with plp

Details for d1b54a_

PDB Entry: 1b54 (more details), 2.1 Å

PDB Description: crystal structure of a yeast hypothetical protein-a structure from bnl's human proteome project
PDB Compounds: (A:) yeast hypothetical protein

SCOPe Domain Sequences for d1b54a_:

Sequence, based on SEQRES records: (download)

>d1b54a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

Sequence, based on observed residues (ATOM records): (download)

>d1b54a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d1b54a_:

Click to download the PDB-style file with coordinates for d1b54a_.
(The format of our PDB-style files is described here.)

Timeline for d1b54a_: