SCOPe 2.05: Domain d1ldcb_: 1ldc B:

Lineage for d1ldcb_ (1ldc B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
   Uniprot P00175
   N-terminal domain homologous to cytochrome b5

8. Domain d1ldcb_: 1ldc B: [28627]
   Other proteins in same PDB: d1ldca2
   complexed with fmn, hem, pyr; mutant

Details for d1ldcb_

PDB Entry: 1ldc, 2.9 Å

PDB Description: x-ray structure of two complexes of the y143f flavocytochrome b2 mutant crystallized in the presence of lactate or phenyl-lactate

PDB Compounds: (B:) l-lactate dehydrogenase

SCOPe Domain Sequences for d1ldcb_:

Sequence, based on SEQRES records:

>d1ldcb_ c.1.4.1 (B:) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tkediarkeqlksllppldniinlydfeylasqtltkqawafyssgandevthrenhnay
hriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcgqgvt
kvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkalfvtv
dapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdieelkkk
tklpivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileqrnlk
dklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrdeiems
mrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Sequence, based on observed residues (ATOM records):

>d1ldcb_ c.1.4.1 (B:) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tkediarkeqlksllppldniinlydfeylasqtltkqawafyssgandevthrenhnay
hriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcgqgvt
kvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkalfvtv
dapslgqrekdmklkfidpsltwkdieelkkktklpivikgvqrtedvikaaeigvsgvv
lsnhggrqldfsrapievlaetmpileqrnlkdklevfvdggvrrgtdvlkalclgakgv
glgrpflyanscygrngvekaieilrdeiemsmrllgvtsiaelkpdlldlstlkartvg
vpndvlynevyegptltefeda

Timeline for d1ldcb_:

• d1ldcb_ first appeared (with stable ids) in SCOP 1.55, called d1ldcb1
  
• d1ldcb_ appears in SCOPe 2.04
  
• d1ldcb_ appears in SCOPe 2.06
  
• d1ldcb_ appears in the current release, SCOPe 2.08