SCOPe 2.02: Domain d1lcoa1: 1lco A:98-511

Lineage for d1lcoa1 (1lco A:98-511)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
   Uniprot P00175
   N-terminal domain homologous to cytochrome b5

8. Domain d1lcoa1: 1lco A:98-511 [28624]
   Other proteins in same PDB: d1lcoa2
   complexed with fmn, hem, ppy; mutant

Details for d1lcoa1

PDB Entry: 1lco, 2.9 Å

PDB Description: x-ray structure of two complexes of the y143f flavocytochrome b2 mutant crystallized in the presence of lactate or phenyl-lactate

PDB Compounds: (A:) l-lactate dehydrogenase

SCOPe Domain Sequences for d1lcoa1:

Sequence, based on SEQRES records:

>d1lcoa1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawafyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdiee
lkkktklpivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileq
rnlkdklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrde
iemsmrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Sequence, based on observed residues (ATOM records):

>d1lcoa1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawafyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsalskfidpsltwkdieelkkktklpivikgvqrtedvik
aaeigvsgvvlsnhggrqldfsrapievlaetmpileqrnlkdklevfvdggvrrgtdvl
kalclgakgvglgrpflyanscygrngvekaieilrdeiemsmrllgvtsiaelkpdlld
lstlkartvgvpndvlynevyegptltefeda

Timeline for d1lcoa1:

• d1lcoa1 first appeared (with stable ids) in SCOP 1.55
  
• d1lcoa1 appears in SCOPe 2.01
  
• d1lcoa1 appears in SCOPe 2.03
  
• d1lcoa1 appears in the current release, SCOPe 2.08