SCOPe 2.08: Domain d1ltdb_: 1ltd B:

Lineage for d1ltdb_ (1ltd B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
   Uniprot P00175
   N-terminal domain homologous to cytochrome b5

8. Domain d1ltdb_: 1ltd B: [28619]
   Other proteins in same PDB: d1ltda2
   complexed with fmn, hem, so3
   has additional subdomain(s) that are not in the common domain
   has additional insertions and/or extensions that are not grouped together

Details for d1ltdb_

PDB Entry: 1ltd, 2.6 Å

PDB Description: the 2.6 angstroms refined structure of the escherichia coli recombinant saccharomyces cerevisiae flavocytochrome b2-sulphite complex

PDB Compounds: (B:) flavocytochrome b2

SCOPe Domain Sequences for d1ltdb_:

Sequence, based on SEQRES records:

>d1ltdb_ c.1.4.1 (B:) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthrenhnay
hriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcgqgvt
kvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkalfvtv
dapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdieelkkk
tklpivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileqrnlk
dklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrdeiems
mrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Sequence, based on observed residues (ATOM records):

>d1ltdb_ c.1.4.1 (B:) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthrenhnay
hriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcgqgvt
kvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkalfvtv
dapslgqrekdmklkfsnskfidpsltwkdieelkkktklpivikgvqrtedvikaaeig
vsgvvlsnhggrqldfsrapievlaetmpileqrnlkdklevfvdggvrrgtdvlkalcl
gakgvglgrpflyanscygrngvekaieilrdeiemsmrllgvtsiaelkpdlldlstlk
artvgvpndvlynevyegptltefeda

Timeline for d1ltdb_:

• d1ltdb_ first appeared (with stable ids) in SCOP 1.55, called d1ltdb1
  
• d1ltdb_ appears in SCOPe 2.07