Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) |
Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins) |
Protein Trimethylamine dehydrogenase, N-terminal domain [51406] (1 species) two other domains are alpha/beta Rossmann-like fold and beta/beta/alpha fold |
Species Methylophilus methylotrophus, w3a1 [TaxId:17] [51407] (5 PDB entries) |
Domain d2tmda1: 2tmd A:1-340 [28616] Other proteins in same PDB: d2tmda2, d2tmda3, d2tmdb2, d2tmdb3 complexed with adp, fmn, sf4 has additional insertions and/or extensions that are not grouped together |
PDB Entry: 2tmd (more details), 2.4 Å
SCOPe Domain Sequences for d2tmda1:
Sequence; same for both SEQRES and ATOM records: (download)
>d2tmda1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} ardpkhdilfepiqigpktlrnrfyqvphcigagsdkpgfqsahrsvkaeggwaalntey csinpesddthrlsariwdegdvrnlkamtdevhkygalagvelwyggahapnmesratp rgpsqyasefetlsyckemdlsdiaqvqqfyvdaakrsrdagfdivyvygahsylplqfl npyynkrtdkyggslenrarfwletlekvkhavgsdcaiatrfgvdtvygpgqieaevdg qkfvemadslvdmwditigdiaewgedagpsrfyqqghtipwvklvkqvskkpvlgvgry tdpekmieivtkgyadiigcarpsiadpflpqkveqgryd
Timeline for d2tmda1: