Structural Classification of Proteins and ASTRAL release 1.75B (January 2013)
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Lineage for d1djqa1 (1djq A:1-340)

  1. Root: SCOP 1.75B
  2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 protein domains)
  6. Protein Trimethylamine dehydrogenase, N-terminal domain [51406] (1 species)
    two other domains are alpha/beta Rossmann-like fold and beta/beta/alpha fold
  7. Species Methylophilus methylotrophus, w3a1 [TaxId:17] [51407] (5 PDB entries)
  8. Domain d1djqa1: 1djq A:1-340 [28614]
    Other proteins in same PDB: d1djqa2, d1djqa3, d1djqb2, d1djqb3
    complexed with adp, fmn, sf4; mutant

Details for d1djqa1

PDB Entry: 1djq (more details)
PDB Description: structural and biochemical characterization of recombinant c of trimethylamine dehydrogenase from methylophilus methylot (sp. w3a1)
PDB Compounds: (A:) trimethylamine dehydrogenase

SCOP Domain Sequences for d1djqa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
ardpkhdilfepiqigpktlrnrfyqvphaigagsdkpgfqsahrsvkaeggwaalntey
csinpesddthrlsariwdegdvrnlkamtdevhkygalagvelwyggahapnmesratp
rgpsqyasefetlsyckemdlsdiaqvqqfyvdaakrsrdagfdivyvygahsylplqfl
npyynkrtdkyggslenrarfwletlekvkhavgsdcaiatrfgvdtvygpgqieaevdg
qkfvemadslvdmwditigdiaewgedagpsrfyqqghtipwvklvkqvskkpvlgvgry
tdpekmieivtkgyadiigcarpsiadpflpqkveqgryd

SCOP Domain Coordinates for d1djqa1:

Click to download the PDB-style file with coordinates for d1djqa1.
(The format of our PDB-style files is described here.)

Timeline for d1djqa1:

d1djqa1 appears in SCOP 1.75A


d1djqa1
(click for larger image)


d1djqa1 in context of chain
Domains from same chain:
d1djqa2, d1djqa3


d1djqa1 in context of PDB
Domains from other chains:
d1djqb1, d1djqb2, d1djqb3

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