Lineage for d1z25a3 (1z25 A:324-544)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2482762Fold c.44: Phosphotyrosine protein phosphatases I-like [52787] (3 superfamilies)
    3 layers: a/b/a; parallel beta-sheet of 4 strands, order 2134
  4. 2482963Superfamily c.44.3: PIWI domain N-terminal-like [310581] (2 families) (S)
  5. 2482964Family c.44.3.1: PIWI domain N-terminal [310609] (4 proteins)
    PubMed 15565169 notes that both halves of PIWI are usually a single evolutionary unit; however, fragments have been characterized separately. The C-terminal half is (c.55.3.10)
  6. 2482973Protein Argonaute homologue PF0537 [310686] (1 species)
  7. 2482974Species Pyrococcus furiosus [TaxId:2261] [310903] (3 PDB entries)
  8. 2482977Domain d1z25a3: 1z25 A:324-544 [284849]
    Other proteins in same PDB: d1z25a1, d1z25a4, d1z25a5
    complexed with mn

Details for d1z25a3

PDB Entry: 1z25 (more details), 2.7 Å

PDB Description: structure of p.furiosus argonaute with bound mn2+
PDB Compounds: (A:) Argonaute

SCOPe Domain Sequences for d1z25a3:

Sequence, based on SEQRES records: (download)

>d1z25a3 c.44.3.1 (A:324-544) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}
iaqelenkirvrddkgnsvpisqlnvqksqlllwtnysrkypvilpyevpekfrkireip
mfiildsglladiqnfatnefrelvksmyyslakkynslakkarstneiglpfldfrgke
kvitedlnsdkgiievveqvssfmkgkelglafiaarnklssekfeeikrrlfnlnvisq
vvnedtlknkrdkydrnrldlfvrhnllfqvlsklgvkyyv

Sequence, based on observed residues (ATOM records): (download)

>d1z25a3 c.44.3.1 (A:324-544) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}
iaqelenkirvrddkgnsvpisqllwtnysrkypvilpyevpekfrkireipmfiildsg
lladiqnfatnefrelvksmyyekvitedlnsdkgiievveqvssfmkgkelglafiaar
nklssekfeeikrrlfnlnvisqvvnedtlknkrdkydrnrldlfvrhnllfqvlsklgv
kyyv

SCOPe Domain Coordinates for d1z25a3:

Click to download the PDB-style file with coordinates for d1z25a3.
(The format of our PDB-style files is described here.)

Timeline for d1z25a3: