SCOPe 2.08: Domain d1am2a_: 1am2 A:

Lineage for d1am2a_ (1am2 A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.86: Hedgehog/intein (Hint) domain [51293] (1 superfamily)
   complex fold made of five beta-hairpin units and a b-ribbon arc

4. Superfamily b.86.1: Hedgehog/intein (Hint) domain [51294] (3 families)
   duplication: contains two intertwined structural repeats

5. Family b.86.1.2: Intein (protein splicing domain) [51298] (5 proteins)

6. Protein GyrA intein [51303] (1 species)
   miniintein lacking the homing endonuclease domain

7. Species Mycobacterium xenopi [TaxId:1789] [51304] (1 PDB entry)

8. Domain d1am2a_: 1am2 A: [28381]

Details for d1am2a_

PDB Entry: 1am2, 2.2 Å

PDB Description: gyra intein from mycobacterium xenopi

PDB Compounds: (A:) mxe gyra intein

SCOPe Domain Sequences for d1am2a_:

Sequence, based on SEQRES records:

>d1am2a_ b.86.1.2 (A:) GyrA intein {Mycobacterium xenopi [TaxId: 1789]}
asitgdalvalpegesvriadivpgarpnsdnaidlkvldrhgnpvladrlfhsgehpvy
avrtveglrvtgtanhpllclvdvagvptllwklideikpgdyaviqrsafsvdcagfar
gkpefapttytvgvpglvrfleahhrdpdakaiadeltdgrfyyakvasvtdagvqpvys
lrvdtadhafitngfvshn

Sequence, based on observed residues (ATOM records):

>d1am2a_ b.86.1.2 (A:) GyrA intein {Mycobacterium xenopi [TaxId: 1789]}
asitgdalvalpegesvriadivpgarpnsdnaidlkvldrhgnpvladrlfhsgehpvy
avrtveglrvtgtanhpllclvdvagvptllwklideikpgdyaviqrsafstvgvpglv
rfleahhrdpdakaiadeltdgrfyyakvasvtdagvqpvyslrvdtadhafitngfvsh
n

Timeline for d1am2a_:

• d1am2a_ first appeared (with stable ids) in SCOP 1.55, called d1am2__
  
• d1am2a_ appears in SCOPe 2.07