Class b: All beta proteins [48724] (180 folds) |
Fold b.86: Hedgehog/intein (Hint) domain [51293] (1 superfamily) complex fold made of five beta-hairpin units and a b-ribbon arc |
Superfamily b.86.1: Hedgehog/intein (Hint) domain [51294] (3 families) duplication: contains two intertwined structural repeats |
Family b.86.1.2: Intein (protein splicing domain) [51298] (5 proteins) |
Protein VMA1-derived endonuclease (VDE) PI-Scei intein [51299] (1 species) also contains a homing endonuclease and DNA-binding domains |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51300] (8 PDB entries) Uniprot P17255 284-737 |
Domain d1vdea1: 1vde A:1-180,A:416-454 [28378] Other proteins in same PDB: d1vdea2, d1vdea3, d1vdeb2, d1vdeb3 |
PDB Entry: 1vde (more details), 2.4 Å
SCOPe Domain Sequences for d1vdea1:
Sequence, based on SEQRES records: (download)
>d1vdea1 b.86.1.2 (A:1-180,A:416-454) VMA1-derived endonuclease (VDE) PI-Scei intein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksqhrahk sdssrevpellkftcnathelvvrtprsvrrlsrtikgveyfevitfemgqkkapdgriv elvkevsksypisegperanelvesyrkasnkayfewtieardlsllgshvrkatyqtya Xcrgfyfelqelkeddyygitlsddsdhqfllanqvvvhn
>d1vdea1 b.86.1.2 (A:1-180,A:416-454) VMA1-derived endonuclease (VDE) PI-Scei intein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksqhrahk sdssrevpellkftcnathelvvrtprsvrrlevitfemgqkkapdgrivelvkevsksy pisegperanelvesyrkasnkayfewtieardlsllgshvrkatyqtyaXcrgfyfelq elkeddyygitlsddsdhqfllanqvvvhn
Timeline for d1vdea1: