Class b: All beta proteins [48724] (126 folds) |
Fold b.86: Hedgehog/intein (Hint) domain [51293] (1 superfamily) complex fold made of five beta-hairpin units and a b-ribbon arc |
Superfamily b.86.1: Hedgehog/intein (Hint) domain [51294] (2 families) duplication: contains two intertwined structural repeats |
Family b.86.1.2: Intein (protein splicing domain) [51298] (3 proteins) |
Protein VMA1-derived endonuclease (VDE) PI-Scei intein [51299] (1 species) also contains a homing endonuclease and DNA-binding domains |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51300] (7 PDB entries) |
Domain d1dfaa1: 1dfa A:1-180,A:416-454 [28375] Other proteins in same PDB: d1dfaa2, d1dfaa3 |
PDB Entry: 1dfa (more details), 2 Å
SCOP Domain Sequences for d1dfaa1:
Sequence, based on SEQRES records: (download)
>d1dfaa1 b.86.1.2 (A:1-180,A:416-454) VMA1-derived endonuclease (VDE) PI-Scei intein {Baker's yeast (Saccharomyces cerevisiae)} cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksqhrahk sdssrevpellkftcnathelvvrtprsvrrlsrtikgveyfevitfemgqkkapdgriv elvkevsksypisegperanelvesyrkasnkayfewtieardlsllgshvrkatyqtya Xcrgfyfelqelkeddyygitlsddsdhqfllanqvvvhn
>d1dfaa1 b.86.1.2 (A:1-180,A:416-454) VMA1-derived endonuclease (VDE) PI-Scei intein {Baker's yeast (Saccharomyces cerevisiae)} cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksqhrahk sdssrevpellkftcnathelvvrtprsvrrlsrtikgveyfevitfemgqkkapdgriv elvkevsksypisekayfewtieardlsllgshvrkatyqtyaXcrgfyfelqelkeddy ygitlsddsdhqfllanqvvvhn
Timeline for d1dfaa1: