Lineage for d1u04a3 (1u04 A:324-544)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2874827Fold c.44: Phosphotyrosine protein phosphatases I-like [52787] (3 superfamilies)
    3 layers: a/b/a; parallel beta-sheet of 4 strands, order 2134
  4. 2875028Superfamily c.44.3: PIWI domain N-terminal-like [310581] (2 families) (S)
  5. 2875029Family c.44.3.1: PIWI domain N-terminal [310609] (4 proteins)
    PubMed 15565169 notes that both halves of PIWI are usually a single evolutionary unit; however, fragments have been characterized separately. The C-terminal half is (c.55.3.10)
  6. 2875038Protein Argonaute homologue PF0537 [310686] (1 species)
  7. 2875039Species Pyrococcus furiosus [TaxId:2261] [310903] (3 PDB entries)
  8. 2875040Domain d1u04a3: 1u04 A:324-544 [282898]
    Other proteins in same PDB: d1u04a1, d1u04a4, d1u04a5
    protein/RNA complex

Details for d1u04a3

PDB Entry: 1u04 (more details), 2.25 Å

PDB Description: crystal structure of full length argonaute from pyrococcus furiosus
PDB Compounds: (A:) hypothetical protein PF0537

SCOPe Domain Sequences for d1u04a3:

Sequence, based on SEQRES records: (download)

>d1u04a3 c.44.3.1 (A:324-544) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}

Sequence, based on observed residues (ATOM records): (download)

>d1u04a3 c.44.3.1 (A:324-544) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}

SCOPe Domain Coordinates for d1u04a3:

Click to download the PDB-style file with coordinates for d1u04a3.
(The format of our PDB-style files is described here.)

Timeline for d1u04a3: