Class b: All beta proteins [48724] (177 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold |
Family b.82.2.14: Histone demethylase core [254153] (4 proteins) Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801 |
Protein JMJD2A core [254342] (1 species) |
Species Human (Homo sapiens) [TaxId:9606] [254775] (41 PDB entries) |
Domain d5fpvf_: 5fpv F: [280438] automated match to d4v2wb_ complexed with mmk, mn, ni, zn |
PDB Entry: 5fpv (more details), 2.44 Å
SCOPe Domain Sequences for d5fpvf_:
Sequence, based on SEQRES records: (download)
>d5fpvf_ b.82.2.14 (F:) JMJD2A core {Human (Homo sapiens) [TaxId: 9606]} lnpsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasyddiddlvi papiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerkywknltf nppiygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmwktsfaw htedmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhkmtlisp lmlkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygkqavlcs crkdmvkismdvfvrkfqperyklwkagkdntvidhtlptpeaaeflk
>d5fpvf_ b.82.2.14 (F:) JMJD2A core {Human (Homo sapiens) [TaxId: 9606]} lnpsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasyddiddlvi papiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerkywknltf nppiygadvngtlyekhvdewnigrlrtildlvekegvntpylyfgmwktsfawhtedmd lysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhkmtlisplmlkky gipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygkqavlcscrkdmv kismdvfvrkfqperyklwkagkdntvidhtlptpeaaeflk
Timeline for d5fpvf_: