SCOPe 2.06: Domain d1dboa_: 1dbo A:

Lineage for d1dboa_ (1dbo A:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.1: Pectin lyase-like [51126] (12 families)
   superhelix turns are made of 3 strands each

5. Family b.80.1.4: Chondroitinase B [51144] (1 protein)
   this is a repeat family; one repeat unit is 1dbg A:263-289 found in domain

6. Protein Chondroitinase B [51145] (1 species)

7. Species Pedobacter heparinus [TaxId:984] [51146] (4 PDB entries)
   Uniprot Q46079 27-506
   synonym: Flavobacterium heparinum

8. Domain d1dboa_: 1dbo A: [28034]

Details for d1dboa_

PDB Entry: 1dbo, 1.7 Å

PDB Description: crystal structure of chondroitinase b

PDB Compounds: (A:) chondroitinase b

SCOPe Domain Sequences for d1dboa_:

Sequence; same for both SEQRES and ATOM records:

>d1dboa_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]}
qvvasnetlyqvvkevkpgglvqiadgtykdvqlivsnsgksglpitikalnpgkvfftg
dakvelrgehlilegiwfkdgnraiqawkshgpglvaiygsynritacvfdcfdeansay
ittsltedgkvpqhcridhcsftdkitfdqvinlnntaraikdgsvggpgmyhrvdhcff
snpqkpgnagggirigyyrndigrclvdsnlfmrqdseaeiitsksqenvyygntylncq
gtmnfrhgdhqvainnfyigndqrfgyggmfvwgsrhviacnyfelsetiksrgnaalyl
npgamasehalafdmliannafinvngyaihfnplderrkeycaanrlkfetphqlmlkg
nlffkdkpyvypffkddyfiagknswtgnvalgvekgipvnisanrsaykpvkikdiqpi
egialdlnaliskgitgkplswdevrpywlkempgtyaltarlsadraakfkavikrnke
h

Timeline for d1dboa_:

• d1dboa_ first appeared (with stable ids) in SCOP 1.55
  
• d1dboa_ appears in SCOPe 2.05
  
• d1dboa_ appears in SCOPe 2.07
  
• d1dboa_ appears in the current release, SCOPe 2.08