Lineage for Species: Phaeodactylum tricornutum [TaxId: 2850]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2970038Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2970344Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 2970628Family d.110.3.0: automated matches [191387] (1 protein)
    not a true family
  6. 2970629Protein automated matches [190492] (24 species)
    not a true protein
  7. 2970774Species Phaeodactylum tricornutum [TaxId:2850] [280317] (4 PDB entries)

PDB entries in Species: Phaeodactylum tricornutum [TaxId: 2850]:

  1. Domain(s) for 5a8b:
    1. 2970781Domain d5a8ba_: 5a8b A: [312468]
      Other proteins in same PDB: d5a8bc2
      automated match to d5dklb_
      complexed with cl, fmn, gol
    2. 2970782Domain d5a8bb_: 5a8b B: [313053]
      Other proteins in same PDB: d5a8bc2
      automated match to d5dklb_
      complexed with cl, fmn, gol
    3. 2970783Domain d5a8bc1: 5a8b C:238-370 [313078]
      Other proteins in same PDB: d5a8bc2
      automated match to d5dklb_
      complexed with cl, fmn, gol
    4. 2970784Domain d5a8bd_: 5a8b D: [313093]
      Other proteins in same PDB: d5a8bc2
      automated match to d5dklb_
      complexed with cl, fmn, gol
  2. Domain(s) for 5dkk:
    1. 2970777Domain d5dkka_: 5dkk A: [280320]
      automated match to d3ue6e_
      complexed with act, edo, fmn
    2. 2970778Domain d5dkkb_: 5dkk B: [280321]
      automated match to d3ue6e_
      complexed with act, edo, fmn
  3. Domain(s) for 5dkl:
    1. 2970779Domain d5dkla_: 5dkl A: [280319]
      automated match to d3ue6e_
      complexed with fmn
    2. 2970780Domain d5dklb_: 5dkl B: [280318]
      automated match to d3ue6e_
      complexed with fmn
  4. Domain(s) for 6t74:
    1. 2970775Domain d6t74a1: 6t74 A:237-375 [382445]
      Other proteins in same PDB: d6t74a2, d6t74b2
      automated match to d5dklb_
      complexed with 1pe, fmn, gol, mli, na; mutant
    2. 2970776Domain d6t74b1: 6t74 B:237-376 [382463]
      Other proteins in same PDB: d6t74a2, d6t74b2
      automated match to d5dklb_
      complexed with 1pe, fmn, gol, mli, na; mutant

More info for Species Phaeodactylum tricornutum [TaxId:2850] from d.110.3.0 automated matches

Timeline for Species Phaeodactylum tricornutum [TaxId:2850] from d.110.3.0 automated matches: