Lineage for d5dk8a1 (5dk8 A:2-75)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (8 species)
  7. 2158532Species Human (Homo sapiens) [TaxId:9606] [54239] (208 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2158540Domain d5dk8a1: 5dk8 A:2-75 [280316]
    Other proteins in same PDB: d5dk8a2, d5dk8b2
    automated match to d2murb_
    complexed with mg

Details for d5dk8a1

PDB Entry: 5dk8 (more details), 1.32 Å

PDB Description: human ubiquitin in the p1 space group
PDB Compounds: (A:) Polyubiquitin-B

SCOPe Domain Sequences for d5dk8a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5dk8a1 d.15.1.1 (A:2-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5dk8a1:

Click to download the PDB-style file with coordinates for d5dk8a1.
(The format of our PDB-style files is described here.)

Timeline for d5dk8a1:

  • d5dk8a1 first appeared in SCOPe 2.05, called d5dk8a_

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Domains from same chain:
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