SCOPe 2.08: Domain d5fdda1: 5fdd A:6-181

Lineage for d5fdda1 (5fdd A:6-181)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)

5. Family c.52.1.34: PA N-terminal domain [254166] (3 proteins)
   Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458

6. Protein PA N-terminal domain [254375] (8 species)

7. Species Influenza A virus [TaxId:93838] [254808] (91 PDB entries)

8. Domain d5fdda1: 5fdd A:6-181 [280158]
   Other proteins in same PDB: d5fdda2
   automated match to d4e5ed_
   complexed with 4p8, mn, so4

Details for d5fdda1

PDB Entry: 5fdd, 2.51 Å

PDB Description: endonuclease inhibitor 1 bound to influenza strain h1n1 polymerase acidic subunit n-terminal region at ph 7.0

PDB Compounds: (A:) Polymerase acidic protein,Polymerase acidic protein

SCOPe Domain Sequences for d5fdda1:

Sequence; same for both SEQRES and ATOM records:

>d5fdda1 c.52.1.34 (A:6-181) PA N-terminal domain {Influenza A virus [TaxId: 93838]}
medfvrqcfnpmivelaektmkeygedlkietnkfaaicthlevcfmysdaskhrfeiie
grdrtmawtvvnsicnttgaekpkflpdlydykenrfieigvtrrevhiyylekankiks
ekthihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqser

Timeline for d5fdda1:

• d5fdda1 first appeared in SCOPe 2.05, called d5fdda_
  
• d5fdda1 appears in SCOPe 2.07