SCOPe 2.08: Domain d5ddpc_: 5ddp C:

Lineage for d5ddpc_ (5ddp C:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families)

5. Family d.58.7.1: Canonical RBD [54929] (70 proteins)
   Pfam PF00076
   Pfam PF13893

6. Protein Splicesomal U1A protein [54932] (2 species)
   duplication: contains two domains of this fold

7. Species Human (Homo sapiens) [TaxId:9606] [54933] (54 PDB entries)
   Uniprot P09012 1-97 ! Uniprot P09012 4-98 ! Uniprot P09012 1-98

8. Domain d5ddpc_: 5ddp C: [280005]
   automated match to d1dz5a_
   protein/RNA complex; complexed with gln, mg, na

Details for d5ddpc_

PDB Entry: 5ddp, 2.3 Å

PDB Description: l-glutamine riboswitch bound with l-glutamine

PDB Compounds: (C:) U1 small nuclear ribonucleoprotein A

SCOPe Domain Sequences for d5ddpc_:

Sequence; same for both SEQRES and ATOM records:

>d5ddpc_ d.58.7.1 (C:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
petrpnhtiyinnlnekikkdelkkslhaifsrfgqildilvsrslkmrgqafvifkevs
satnalrsmqgfpfydkpmriqyaktdsdiiak

Timeline for d5ddpc_:

• d5ddpc_ first appeared in SCOPe 2.05
  
• d5ddpc_ appears in SCOPe 2.07