Lineage for d4v2ob1 (4v2o B:1-78)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2325562Fold a.64: Saposin-like [47861] (2 superfamilies)
    5 helices; folded leaf, closed
  4. 2325563Superfamily a.64.1: Saposin [47862] (5 families) (S)
    Lipid-binding can promote conformational changes and oligomerisation in some members
  5. 2325603Family a.64.1.3: Saposin B [81806] (2 protein domains)
    the alternative subunit conformation is an open four-helical bundle; helices 3 and 4 form a contiguous helix
  6. 2325609Protein automated matches [279847] (1 species)
    not a true protein
  7. 2325610Species Human (Homo sapiens) [TaxId:9606] [279848] (1 PDB entry)
  8. 2325612Domain d4v2ob1: 4v2o B:1-78 [279851]
    Other proteins in same PDB: d4v2ob2, d4v2oc2
    automated match to d1n69a_
    complexed with clq

Details for d4v2ob1

PDB Entry: 4v2o (more details), 2.13 Å

PDB Description: structure of saposin b in complex with chloroquine
PDB Compounds: (B:) saposin-b

SCOPe Domain Sequences for d4v2ob1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4v2ob1 a.64.1.3 (B:1-78) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4v2ob1:

Click to download the PDB-style file with coordinates for d4v2ob1.
(The format of our PDB-style files is described here.)

Timeline for d4v2ob1: