SCOPe 2.08: Domain d5dz2b_: 5dz2 B:

Lineage for d5dz2b_ (5dz2 B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Streptomyces coelicolor [TaxId:100226] [279808] (22 PDB entries)

8. Domain d5dz2b_: 5dz2 B: [279809]
   automated match to d1ps1a_
   complexed with 212, mg

Details for d5dz2b_

PDB Entry: 5dz2, 2.11 Å

PDB Description: geosmin synthase from streptomyces coelicolor n-terminal domain complexed with three mg2+ ions and alendronic acid

PDB Compounds: (B:) Germacradienol/geosmin synthase

SCOPe Domain Sequences for d5dz2b_:

Sequence, based on SEQRES records:

>d5dz2b_ a.128.1.0 (B:) automated matches {Streptomyces coelicolor [TaxId: 100226]}
qpfqlphfylphparlnphldearahsttwaremgmlegsgvweqsdleahdygllcayt
hpdcdgpalslitdwyvwvfffddhflekykrsqdrlagkahldrlplfmplddaagmpe
prnpveagladlwtrtvpamsadwrrrfavatehllnesmwelsninegrvanpveyiem
rrkvggapwsaglveyataevpaavagtrplrvlmetfsdavhlrndlfsyqrevedege
lsngvlvletffgcttqeaadlvndvltsrlhqfehtaftevpavalekgltplevaavg
aytkglqdwqsgghewhmrssrymnk

Sequence, based on observed residues (ATOM records):

>d5dz2b_ a.128.1.0 (B:) automated matches {Streptomyces coelicolor [TaxId: 100226]}
qpfqlphfylphparlnphldearahsttwaremgmlegsgvweqsdleahdygllcayt
hpdcdgpalslitdwyvwvfffddhflekykrsqdrlagkahldrlplfmplgmpeprnp
veagladlwtrtvpamsadwrrrfavatehllnesmwelsninegrvanpveyiemrrkv
ggapwsaglveyataevpaavagtrplrvlmetfsdavhlrndlfsyqrevedegelsng
vlvletffgcttqeaadlvndvltsrlhqfehtaftevpavalekgltplevaavgaytk
glqdwqsgghewhmrssrymnk

Timeline for d5dz2b_:

• d5dz2b_ first appeared in SCOPe 2.05
  
• d5dz2b_ appears in SCOPe 2.07