Lineage for d5d0kb_ (5d0k B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (269 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2501802Domain d5d0kb_: 5d0k B: [279799]
    Other proteins in same PDB: d5d0ka1, d5d0ka2, d5d0kd1, d5d0kd2, d5d0kg1, d5d0kg2, d5d0kj1, d5d0kj2
    automated match to d2murb_
    complexed with zn

Details for d5d0kb_

PDB Entry: 5d0k (more details), 2.65 Å

PDB Description: structure of ube2d2:rnf165:ub complex
PDB Compounds: (B:) Polyubiquitin-B

SCOPe Domain Sequences for d5d0kb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5d0kb_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5d0kb_:

Click to download the PDB-style file with coordinates for d5d0kb_.
(The format of our PDB-style files is described here.)

Timeline for d5d0kb_: