SCOPe 2.08: Domain d5e35a1: 5e35 A:11-324

Lineage for d5e35a1 (5e35 A:11-324)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (22 species)
   includes rudiment esterase domain

7. Species Influenza A virus (a/chicken/vietnam/ncvd-093/2008(h5n1)) [TaxId:581024] [279718] (3 PDB entries)

8. Domain d5e35a1: 5e35 A:11-324 [279729]
   Other proteins in same PDB: d5e35a2, d5e35b_
   automated match to d4n5ya_
   complexed with nag; mutant

Details for d5e35a1

PDB Entry: 5e35, 2.7 Å

PDB Description: crystal structure of h5 hemagglutinin mutant (n224k, q226l, n158d and l133a deletion) from the influenza virus a/chicken/vietnam/ncvd- 093/2008 (h5n1) with lstc

PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d5e35a1:

Sequence; same for both SEQRES and ATOM records:

>d5e35a1 b.19.1.2 (A:11-324) Hemagglutinin {Influenza A virus (a/chicken/vietnam/ncvd-093/2008(h5n1)) [TaxId: 581024]}
dqicvgyhannsteqvdtimeknitvthaqdilekthngklcnlngvkplilkdcsvagw
llgnpmcdeflnvsewsyivekaspanglcypgdfndyeelkhllsrinhfekikiipks
ywsnhetsgvssacsylenpsffrnvvwltkkdntyppikvnytnanqkdllvlwgihhp
nneaeqkmiyqnlntyvsvgtstlnqrlvpkiatrskvkglsgrmdffwtilkpndtinf
dsngnfiapeyaykivkkgdsaimkseleygncntkcqtpigainssmpfhnihpltige
cpkyvksnrlvlatglrnap

Timeline for d5e35a1:

• d5e35a1 first appeared in SCOPe 2.05, called d5e35a_
  
• d5e35a1 appears in SCOPe 2.07