SCOPe 2.05: Domain d5dord_: 5dor D:

Lineage for d5dord_ (5dor D:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.163: DNA breaking-rejoining enzymes [56348] (1 superfamily)
   core: alpha3-beta3-alpha4; one side of beta-sheet is exposed

4. Superfamily d.163.1: DNA breaking-rejoining enzymes [56349] (2 families)

5. Family d.163.1.1: Lambda integrase-like, catalytic core [56350] (6 proteins)

6. Protein automated matches [254540] (2 species)
   not a true protein

7. Species Enterobacteria phage [TaxId:10679] [278332] (2 PDB entries)

8. Domain d5dord_: 5dor D: [279704]
   automated match to d1aiha_
   complexed with po4, zn

Details for d5dord_

PDB Entry: 5dor, 2.5 Å

PDB Description: p2 integrase catalytic domain in space group p21

PDB Compounds: (D:) integrase

SCOPe Domain Sequences for d5dord_:

Sequence, based on SEQRES records:

>d5dord_ d.163.1.1 (D:) automated matches {Enterobacteria phage [TaxId: 10679]}
gyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktktnkpr
tvpiseavakmiadnkrgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfmin
ggsiitlqrilghtrieqtmvyahfapeylqdaislnplrggteae

Sequence, based on observed residues (ATOM records):

>d5dord_ d.163.1.1 (D:) automated matches {Enterobacteria phage [TaxId: 10679]}
gyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvprtvpise
avakmiadgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfminggsiitlqr
ilghtrieqtmvyahfapeylqdaislnplrggteae

Timeline for d5dord_:

• d5dord_ is new in SCOPe 2.05-stable
  
• d5dord_ appears in SCOPe 2.06
  
• d5dord_ appears in the current release, SCOPe 2.08